PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK22704.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family NAC
Protein Properties Length: 126aa    MW: 15224.5 Da    PI: 9.6196
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK22704.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.31.1e-3011148127
        NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlskkgelvglkk 104
                +Ptd el+  +Lk k++g++ +l++ i+e+d++++ePw+Lp k ++k++  ew+f ++ d ky++ +k+ +r+tk+gyWk tg++++ +      +g+k+
  PK22704.1   1 NPTDTELI-AHLKLKIDGERSKLDDYIAEIDVCNWEPWELPaKsMLKSDIYEWWFLCRLDYKYSKnSKQVKRSTKTGYWKRTGEERKAKG----CTGMKR 95 
                6*******.89************999***************5434455555************973667788************999876....79**** PP

        NAM 105 tLvfykgrapkgektdWvmheyr 127
                 Lvfykgr+    +tdWv+hey 
  PK22704.1  96 NLVFYKGRK----RTDWVIHEYY 114
                *****7775....78*******6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023654.0E-171113IPR003441NAC domain
PROSITE profilePS5100529.7511126IPR003441NAC domain
SuperFamilySSF1019412.09E-282120IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
NPTDTELIAH LKLKIDGERS KLDDYIAEID VCNWEPWELP AKSMLKSDIY EWWFLCRLDY  60
KYSKNSKQVK RSTKTGYWKR TGEERKAKGC TGMKRNLVFY KGRKRTDWVI HEYYYPQPHI  120
NLKDQV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-18111322138Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015888956.13e-39PREDICTED: protein NTM1-like 9 isoform X1
RefseqXP_015888957.13e-39PREDICTED: protein NTM1-like 9 isoform X2
SwissprotF4JN353e-31NTL9_ARATH; Protein NTM1-like 9
TrEMBLG7ZZ261e-34G7ZZ26_MEDTR; NAC domain protein
STRINGPOPTR_0001s45700.18e-32(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2557023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-32NAC transcription factor-like 9